Top 10 Hotels in Rookery Bay National Estuarine Research Reserve (from $70) 2026 - Competitive Prices

An aerial view of a coastal area with dense vegetation and a sandy beach.

Upfront pricing
Our total price for your stay includes taxes and fees
Treat yourself
Save 10% or more on over 100,000 hotels worldwide with Member Prices
Learn about One Key
Be picky
Search almost a million properties worldwide

Go beyond your typical stay in Rookery Bay National Estuarine Research Reserve

Pet friendly

Villa

Apartment

Apart hotel

Condo

Spa

Hot tub

Pool

Cottage

Resort

Family friendly

Waterpark

Check prices for these dates

Tonight

Tomorrow

This weekend

Next weekend

Our top choices for Rookery Bay National Estuarine Research Reserve hotels

A resort pool area with a view of the beach and ocean at sunset.

A spacious lobby with a central table, large windows with a view of a pool and palm trees, and a modern chandelier.

An outdoor dining area with round tables, clear chairs, and teal tablecloths.

A wooden deck with a table and chairs, surrounded by lush greenery and palm trees, overlooking a beach.

1. Hilton Marco Island Beach Resort and Spa

South End

Robert

$230 nightly

$255 total

Sep 30 - Oct 1

Total with taxes and fees

An indoor water park with a large pool, water slides, and various play structures.

A hotel room with a dining table, red chairs, a sofa, a TV, a lamp, and a view of the outdoors.

A hotel room with a bed, a leather chair, a small table, a lamp, and a window with curtains.

A hotel with a central courtyard, multiple parking lots, and a large building with a prominent entrance.

2. Great Wolf Lodge Naples

Rural Estates

Dwayne

$187 nightly

$208 total

Sep 24 - Sep 25

Total with taxes and fees

A pier extending into the ocean with overwater bungalows.

A waterfront hotel with multiple balconies, a marina with boats, and lush greenery.

A resort pool with lounge chairs and palm trees, surrounded by a marina and a body of water.

A spacious lobby with a high ceiling, multiple seating areas, and a central open space.

3. Hyatt House Naples/5th Avenue

Old Naples

Tanya

$164 nightly

$182 total

Sep 24 - Sep 25

Total with taxes and fees

A balcony with a table and chairs, overlooking a beach.

A hotel room with a large window offering a view of the beach and ocean.

A resort with a pool, beach, and ocean view.

A spacious lobby with a high ceiling, chandeliers, and a reception area.

4. Marco Beach Ocean Suites

South End

Ian

$160 nightly

$178 total

Sep 28 - Sep 29

Total with taxes and fees

A bar area with wooden chairs, a bar counter, and a tropical-themed decor including a thatched ceiling and a sign with a lime slice.

A hotel room with a bed, a red pillow with the word "WANDERER," and a large painting of a tropical island on the wall.

A fire pit surrounded by blue chairs in an outdoor patio area with tropical plants and a white wall in the background.

A poolside bar with a tropical theme, including a thatched roof and a lime sign.

5. Compass by Margaritaville Hotel Naples

Central Naples

Lucy Thatcher

$132 nightly

$147 total

Oct 12 - Oct 13

Total with taxes and fees

A pool area with lounge chairs and umbrellas, surrounded by palm trees.

A modern bar area with a long counter, white bar stools, and ceiling fans.

A restaurant with wooden tables, a floral bench, and hanging lights.

A lobby with a rustic brick wall, hanging lights, a wooden reception desk, and a wooden floor.

6. The Perry Hotel Naples

Naples

Jairo

$151 nightly

$167 total

Sep 24 - Sep 25

Total with taxes and fees

A pool with a waterfall feature, surrounded by palm trees and lounge chairs.

A balcony with a table, chairs, and a bottle of wine.

A marina with boats docked, a waterway, and buildings with balconies and railings.

A modern hotel room with a sofa, armchairs, a dining table, and a large window with a view of palm trees.

7. Naples Bay Resort & Marina

Oyster Bay

Victor

A hotel with a pool, palm trees, and a lit-up building at dusk.

A beachside bar area with thatched umbrellas, palm trees, and a view of the ocean at dusk.

A beachside lounge with wicker furniture, a thatched roof, and a view of a high-rise hotel in the background.

A beach with white sand and a clear blue sky. There are two white beach umbrellas and two lounge chairs.

8. JW Marriott Marco Island Beach Resort

South End

thomas

$649 nightly

$720 total

Sep 25 - Sep 26

Total with taxes and fees

A spacious lobby with a central chandelier, seating areas, and a large decorative rug.

A swimming pool with a stone waterfall feature, surrounded by lounge chairs and palm trees.

A formal outdoor dining area with round tables set for a meal, string lights overhead, and a building with arched windows in the background.

A hotel with a symmetrical facade, palm trees, and two flags.

9. Hilton Naples

Park Shore

Roshelle

$130 nightly

$145 total

Sep 30 - Oct 1

Total with taxes and fees

An outdoor bar area with bamboo ceiling beams, multiple tables and chairs, and a TV screen.

An outdoor patio with tables and chairs, umbrellas, and potted plants.

A modern bedroom with a large bed, a sofa, a nightstand, and a view of the city.

A marina with boats docked, a waterfront promenade with outdoor seating, and multi-story buildings in the background.

10. Bayfront Inn Fifth Avenue

Redevelopment Area

Carlos

$97 nightly

$108 total

Sep 29 - Sep 30

Total with taxes and fees

A garden pathway with palm trees, red flowers, and a thatched-roof structure.

A pool area with lounge chairs and a view of a lake.

A modern kitchen with stainless steel appliances, a central island, and a dining area with a sofa and coffee table.

A kitchen with wooden cabinets, a stainless steel refrigerator, a microwave, and a sink.

11. Marco Island Lakeside Inn

Marco Island

Rafael

$100 nightly

$111 total

Sep 24 - Sep 25

Total with taxes and fees

A hotel entrance with a covered walkway, palm trees, and a sign for 'CULTA INN & SUITES'.

A covered garden area with a central fountain, surrounded by palm trees and flowering plants.

A hotel lobby with a reception desk, seating area with chairs, and a large window with blinds.

A hotel lobby with a seating area, a reception desk, and large windows.

12. La Quinta Inn & Suites by Wyndham Naples Downtown

East Naples

Noris

$82 nightly

$91 total

Oct 4 - Oct 5

Total with taxes and fees

A balcony with a view of the beach, white railings, and a lounge chair with towels.

A pool area with lounge chairs and umbrellas, surrounded by palm trees and a building with a red-tiled roof.

An outdoor wedding venue with round tables, chairs, and umbrellas, set against a backdrop of palm trees and a view of the sea.

A beach with white sand, palm trees, and lounge chairs with umbrellas.

13. LaPlaya Beach & Golf Resort - A Noble House Resort

Vanderbilt Beach

Christina

$472 nightly

$523 total

Sep 28 - Sep 29

Total with taxes and fees

A wooden deck with lounge chairs and a table, a pool, and a building with a balcony.

An aerial view of a waterfront property with a swimming pool, outdoor seating, and a dock.

A hotel room with a bed, a desk, and a chair.

A kitchen with a dining table, chairs, a microwave, and a coffee maker.

14. The Boat House

Olde Marco

Jaci

$127 nightly

$141 total

Sep 24 - Sep 25

Total with taxes and fees

A balcony with a view of the beach, a pool, and a dining area with outdoor furniture.

A modern living room with a flat-screen TV, grey sofas, a wooden dining table, and a large window offering a view of the city and ocean.

A swimming pool with lounge chairs and umbrellas, surrounded by palm trees and a hotel building.

A modern hotel complex with multiple high-rise buildings, a central courtyard with a swimming pool, and lush greenery surrounding the property.

15. Marriott's Crystal Shores

South End

KELERYN M

$559 nightly

$620 total

Sep 28 - Sep 29

Total with taxes and fees

A hotel with a large pool, multiple balconies, and outdoor seating areas.

A bar area with a curved ceiling, bar stools, and a counter with bottles.

A beach with striped beach umbrellas and lounge chairs.

A large hotel with multiple swimming pools, a central courtyard, and a view of the surrounding landscape.

16. Signia Hilton Naples Grande Beach Resort

Pelican Bay

Peter

A cozy outdoor seating area with a white bench and potted plants, a sign for 'Bijoux' gelateria, and a brick pathway.

A bar area with wooden bar counters, stools, and a variety of bottles and glasses.

A hotel with a blue roof, palm trees, and a sign for hotel registration.

A gated entrance to a pool area with a sign indicating pool hours and restrictions.

17. Olde Marco Island Inn and Suites

Olde Marco

Scott

$239 nightly

$265 total

Oct 8 - Oct 9

Total with taxes and fees

A modern hotel lobby with a dining area, seating arrangements, and large potted plants.

A modern living room with a sofa, coffee table, and a dining area.

A modern living room with a sectional sofa, glass coffee table, and patterned chairs.

A modern hotel lobby with a central bar area, seating arrangements, and a view of the cityscape.

18. AC Hotel by Marriott Naples 5th Avenue

Redevelopment Area

Michelle

$179 nightly

$199 total

Sep 27 - Sep 28

Total with taxes and fees

A swimming pool with a small island, lounge chairs, and a grassy area.

A rooftop lounge area with blue-striped sofas and tables, a pool with sun loungers, and umbrellas.

A spacious lobby with a high ceiling, a grand chandelier, a staircase, and a reception area with a glass coffee table and white sofas.

A beach setting with a striped canopy tent, two striped chairs, a table with a drink, and a bag on the sand.

19. Inn on Fifth

Old Naples

Chad and Alyson

$373 nightly

$414 total

Sep 28 - Sep 29

Total with taxes and fees

A swimming pool with a tiled edge, surrounded by palm trees and a red umbrella.

A spacious indoor area with multiple seating arrangements, including chairs and tables, and large windows offering views of the outside.

An outdoor patio area with wicker furniture, a round table, and a view of the evening sky.

A modern kitchen with a built-in microwave, coffee maker, and dishwasher.

20. Home2 Suites Naples I-75 Pine Ridge Road, FL

Naples

Karen

$122 nightly

$136 total

Sep 30 - Oct 1

Total with taxes and fees

View all properties

Save an average of 15% on thousands of hotels when you're signed in

Stay near popular Rookery Bay National Estuarine Research Reserve attractions

South Naples and Marco Island Beaches

9.2/10 (82 reviews)

Why not spend a lazy afternoon at South Naples and Marco Island Beaches during your trip to Naples? Make time to visit the area's shops, or simply enjoy its top-notch restaurants.

See properties

Cannon Beach

Why not spend a lazy afternoon at Cannon Beach during your trip to Naples? Amble around the area's beautiful beaches or seek out the golf courses.

See properties

Rebecca's Cove Beach Park and Landing

Why not spend a lazy afternoon at Rebecca's Cove Beach Park and Landing during your trip to Naples? Wander the beautiful beaches or discover the area's beautiful sunsets.

See properties

Susan's Beach Park and Landing

Why not spend a lazy afternoon at Susan's Beach Park and Landing during your trip to Naples? Stroll along the area's beautiful beaches, or simply savor its top-notch restaurants.

See properties

Briggs Nature Center

10.0/10 (1 review)

Explore the great outdoors at Briggs Nature Center and enjoy the beautiful sunsets during your trip to Naples. Wander the beautiful beaches and seaside in this family-friendly area.

See properties

Learn more about Rookery Bay National Estuarine Research Reserve

Explore attractions like Hideaway Beach and South Naples and Marco Island Beaches as you discover things to see and do in Rookery Bay National Estuarine Research Reserve.

See all hotels in Rookery Bay National Estuarine Research Reserve

Top Rookery Bay National Estuarine Research Reserve Hotel Reviews

Bayfront Inn Fifth Avenue

10/10 Excellent

"Awesome service"

The Perry Hotel Naples

10/10 Excellent

"Great all around!"

La Quinta Inn & Suites by Wyndham Bonita Springs Naples N.

10/10 Excellent

"Excelente atención y muy limpio."

Hilton Marco Island Beach Resort and Spa

8/10 Good

"The restaurant needs a screen on the terrace , due to the birds out of control.Staff is excellent, the hotel is a little dated, rooms are very nice and the access to the beach is really close. Overall a good place for small vacation in the West Coast"

Hyatt House Naples/5th Avenue

10/10 Excellent

"Me gustó el hotel calidad y precio adecuados y el mar está bien cerca"

AC Hotel by Marriott Naples 5th Avenue

10/10 Excellent

"Everything is perfect and beautiful in the hotel"

Great Wolf Lodge Naples

10/10 Excellent

"Todo perfecto ! Nos encantó y sin dudarlo regresaríamos muchas veces más!"

Marco Beach Ocean Suites

10/10 Excellent

"Good"

Hilton Naples

10/10 Excellent

"Me gustó la limpieza y el orden de todas las áreas del hotel, la atención del personal y el respeto"

More cheap stays in Rookery Bay National Estuarine Research Reserve

Conty's Motel

11238 Tamiami Trail East Naples FL

$65 nightly

$72 total

Sep 24 - Sep 25

Total with taxes and fees

Red Roof Inn PLUS+ & Suites Naples Downtown-5th Ave S

1925 Davis Blvd Naples FL

$70 nightly

$78 total

Sep 27 - Sep 28

Total with taxes and fees

Best Western Naples Plaza Hotel

6400 Dudley Dr Naples FL

$79 nightly

$88 total

Sep 24 - Sep 25

Total with taxes and fees

8.8/10 Excellent! (1,000 reviews)

Hampton Inn Naples Central

Naples FL

$94 nightly

$105 total

Sep 30 - Oct 1

Total with taxes and fees

8.8/10 Excellent! (1,000 reviews)

Holiday Inn Express Hotel Naples Downtown - 5th Avenue

Naples FL

$106 nightly

$118 total

Sep 27 - Sep 28

Total with taxes and fees

9.2/10 Wonderful! (1,004 reviews)

Marco Beach Ocean Suites

480 S Collier Blvd Marco Island FL

$160 nightly

$178 total

Sep 28 - Sep 29

Total with taxes and fees

8.8/10 Excellent! (1,532 reviews)

Hotels in Rookery Bay National Estuarine Research Reserve with star-rating

Explore a world of travel with Expedia

Things to do in Marco Island

Find hotels in Rookery Bay National Estuarine Research Reserve, FL from $70

Upfront pricing

Treat yourself

Be picky

Go beyond your typical stay in Rookery Bay National Estuarine Research Reserve

Check prices for these dates

Filter by

Star rating

Guest rating

Our top choices for Rookery Bay National Estuarine Research Reserve hotels

1. Hilton Marco Island Beach Resort and Spa

2. Great Wolf Lodge Naples

3. Hyatt House Naples/5th Avenue

4. Marco Beach Ocean Suites

5. Compass by Margaritaville Hotel Naples

6. The Perry Hotel Naples

7. Naples Bay Resort & Marina

8. JW Marriott Marco Island Beach Resort

9. Hilton Naples

10. Bayfront Inn Fifth Avenue

11. Marco Island Lakeside Inn

12. La Quinta Inn & Suites by Wyndham Naples Downtown

13. LaPlaya Beach & Golf Resort - A Noble House Resort

14. The Boat House

15. Marriott's Crystal Shores

16. Signia Hilton Naples Grande Beach Resort

17. Olde Marco Island Inn and Suites

18. AC Hotel by Marriott Naples 5th Avenue

19. Inn on Fifth

20. Home2 Suites Naples I-75 Pine Ridge Road, FL

Stay near popular Rookery Bay National Estuarine Research Reserve attractions

South Naples and Marco Island Beaches

Cannon Beach

Rebecca's Cove Beach Park and Landing

Susan's Beach Park and Landing

Briggs Nature Center

Learn more about Rookery Bay National Estuarine Research Reserve

Top Rookery Bay National Estuarine Research Reserve Hotel Reviews

Bayfront Inn Fifth Avenue

The Perry Hotel Naples

La Quinta Inn & Suites by Wyndham Bonita Springs Naples N.

Hilton Marco Island Beach Resort and Spa

Hyatt House Naples/5th Avenue

AC Hotel by Marriott Naples 5th Avenue

Great Wolf Lodge Naples

Marco Beach Ocean Suites

Hilton Naples

More cheap stays in Rookery Bay National Estuarine Research Reserve

Conty's Motel

Red Roof Inn PLUS+ & Suites Naples Downtown-5th Ave S

Best Western Naples Plaza Hotel

Hampton Inn Naples Central

Holiday Inn Express Hotel Naples Downtown - 5th Avenue

Marco Beach Ocean Suites

Hotels in Rookery Bay National Estuarine Research Reserve with star-rating

Explore a world of travel with Expedia

Go further with the Expedia app